Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
DM82_3623Prolyl oligopeptidase family protein. (214 aa)    
Predicted Functional Partners:
DM82_3622
Thioredoxin-like [2Fe-2S] ferredoxin family protein.
       0.712
DM82_3621
vanZ like family protein.
 
     0.610
gshA-2
gshA_ferroox: glutamate--cysteine ligase.
  
     0.526
DM82_3620
Hypothetical protein.
       0.480
DM82_67
SCP-2 sterol transfer family protein.
 
     0.473
secB
Protein-export chaperone SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
  
    0.462
DM82_3619
Mce related family protein.
       0.458
DM82_2596
Hypothetical protein.
 
     0.444
DM82_3618
Miro-like family protein.
       0.441
coq7
Ubiquinone biosynthesis COQ7 family protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
 
     0.436
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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