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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM82_3635Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein. (403 aa)    
Predicted Functional Partners:
fadJ_2
enoyl-CoA hydratase/isomerase family protein.
 
 0.974
fadB
enoyl-CoA hydratase/isomerase family protein.
 
 0.931
DM82_3636
Hypothetical protein; acyl-CoA dehydrogenase, C-terminal domain protein.
    
0.863
fadJ_1
enoyl-CoA hydratase/isomerase family protein.
  
 0.847
DM82_77
enoyl-CoA hydratase/isomerase family protein.
  
 0.847
DM82_643
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
     0.826
caiD_4
enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  0.725
fadD_3
AMP-binding enzyme family protein.
 
 
  0.719
frc_5
coA-transferase III family protein; Belongs to the CoA-transferase III family.
  
 
  0.705
echA8_6
enoyl-CoA hydratase/isomerase family protein.
  
  0.686
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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