Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
motB_3type_VI_ompA: type VI secretion system OmpA/MotB family protein. (439 aa)    
Predicted Functional Partners:
DM82_3759
Hypothetical protein.
 
  
 0.989
DM82_3763
Type VI secretion lipofamily protein.
 
  
 0.977
DM82_3760
Intracellular multiplication and macrophage-killing family protein.
 
 
 0.973
DM82_3762
Hypothetical protein.
 
  
 0.972
DM82_4984
impE family protein.
 
  
 0.967
DM82_4980
Hypothetical protein.
 
  
 0.962
DM82_4619
Hypothetical protein.
 
  
 0.959
DM82_3756
Hypothetical protein.
 
  
 0.945
DM82_4981
Hypothetical protein.
 
  
 0.918
DM82_2785
Hypothetical protein.
 
  
 0.912
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.