Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
DM82_3764Hypothetical protein. (130 aa)    
Predicted Functional Partners:
htpG
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; Molecular chaperone. Has ATPase activity.
   
 0.784
zraS_3
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein.
  
 
 0.732
evgS
Response regulator.
   
 
 0.682
DM82_3765
FHA domain protein.
       0.671
DM82_4519
Pyridine nucleotide-disulfide oxidoreductase family protein.
  
 0.625
cph2_1
GGDEF: diguanylate cyclase domain protein.
  
 
 0.580
DM82_1577
Ankyrin repeat family protein.
    
 0.561
DM82_837
Caspase domain protein.
    
 0.561
DM82_5804
Hypothetical protein.
     
 0.554
arcB_4
Sensory box protein.
   
 
 0.541
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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