STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM82_3791Pyoverdine/dityrosine biosynthesis family protein. (352 aa)    
Predicted Functional Partners:
pvcB
Paerucumarin biosynthesis protein PvcB.
 
 0.997
hpaB
Hypothetical protein; 4-hydroxyphenylacetate 3-hydroxylase C terminal family protein.
     
 0.784
asnB-2
asn_synth_AEB: asparagine synthase.
       0.586
DM82_4850
Hypothetical protein.
  
     0.535
qorA_3
Zinc-binding dehydrogenase family protein.
       0.517
DM82_6008
Acyltransferase family protein.
  
     0.492
hpcB_2
Catalytic LigB subunit of aromatic ring-opening dioxygenase family protein.
       0.429
melO
Tyrosinase.
  
     0.419
hmp
Flavohemoprotein; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.
  
     0.407
pvdA
FAD-NAD(P)-binding family protein.
  
     0.403
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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