Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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hisQ_4HEQRo_perm_3TM: amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein. (240 aa)    
Predicted Functional Partners:
hisP_4
ABC transporter family protein.
 
 
 0.989
fliY_6
Bacterial extracellular solute-binding s, 3 family protein.
 0.984
hisM_4
HEQRo_perm_3TM: amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein.
 
 
0.972
glnH_2
Bacterial extracellular solute-binding s, 3 family protein.
 
 0.867
hisP_3
ABC transporter family protein.
 
  
 0.860
hisP_2
ABC transporter family protein.
 
  
 0.858
hisP_1
ABC transporter family protein.
 
  
 0.850
fliY_3
Bacterial extracellular solute-binding s, 3 family protein.
 
 0.811
fliY_1
Bacterial extracellular solute-binding s, 3 family protein.
 
 0.810
glnH_1
Bacterial extracellular solute-binding s, 3 family protein.
 
 0.805
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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