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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM82_3875Hypothetical protein. (107 aa)    
Predicted Functional Partners:
DM82_3874
Flagellar hook-length control FliK family protein.
       0.773
fliS-2
fliS: flagellar protein FliS.
       0.773
fliA_2
fliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family protein; Belongs to the sigma-70 factor family.
       0.701
DM82_3873
Hypothetical protein.
       0.701
fliD_3
Flagellar hook-associated family protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
       0.631
flgJ_2
mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein.
       0.552
DM82_3870
flgN family protein.
       0.552
flgM-2
flgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM.
       0.552
DM82_3878
Hypothetical protein.
       0.459
fliI_2
fliI_yscN: ATPase FliI/YscN family protein.
       0.459
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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