Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
apxIB | hlyB | DM82_5447 | DM82_2772 | ABC transporter family protein. | ABC transporter family protein. | 0.916 |
apxIB | lgrD_1 | DM82_5447 | DM82_1817 | ABC transporter family protein. | NRPS-para261: non-ribosomal peptide synthase TIGR01720 domain protein. | 0.439 |
apxIB | tycC_2 | DM82_5447 | DM82_4026 | ABC transporter family protein. | AA-adenyl-dom: amino acid adenylation domain protein. | 0.443 |
apxIB | yqjH | DM82_5447 | DM82_3933 | ABC transporter family protein. | Siderophore-interacting FAD-binding domain protein. | 0.795 |
dhbE_2 | dhbF_1 | DM82_4182 | DM82_1680 | Salicyl_syn: salicylate synthase. | AA-adenyl-dom: amino acid adenylation domain protein. | 0.977 |
dhbE_2 | dltA | DM82_4182 | DM82_1682 | Salicyl_syn: salicylate synthase. | D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1. | 0.977 |
dhbE_2 | dltA-2 | DM82_4182 | DM82_5237 | Salicyl_syn: salicylate synthase. | D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1. | 0.978 |
dhbE_2 | lgrD_1 | DM82_4182 | DM82_1817 | Salicyl_syn: salicylate synthase. | NRPS-para261: non-ribosomal peptide synthase TIGR01720 domain protein. | 0.978 |
dhbE_2 | tycC_2 | DM82_4182 | DM82_4026 | Salicyl_syn: salicylate synthase. | AA-adenyl-dom: amino acid adenylation domain protein. | 0.978 |
dhbE_2 | yqjH | DM82_4182 | DM82_3933 | Salicyl_syn: salicylate synthase. | Siderophore-interacting FAD-binding domain protein. | 0.968 |
dhbF_1 | dhbE_2 | DM82_1680 | DM82_4182 | AA-adenyl-dom: amino acid adenylation domain protein. | Salicyl_syn: salicylate synthase. | 0.977 |
dhbF_1 | dltA | DM82_1680 | DM82_1682 | AA-adenyl-dom: amino acid adenylation domain protein. | D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1. | 0.996 |
dhbF_1 | dltA-2 | DM82_1680 | DM82_5237 | AA-adenyl-dom: amino acid adenylation domain protein. | D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1. | 0.998 |
dhbF_1 | lgrD_1 | DM82_1680 | DM82_1817 | AA-adenyl-dom: amino acid adenylation domain protein. | NRPS-para261: non-ribosomal peptide synthase TIGR01720 domain protein. | 0.999 |
dhbF_1 | tycC_2 | DM82_1680 | DM82_4026 | AA-adenyl-dom: amino acid adenylation domain protein. | AA-adenyl-dom: amino acid adenylation domain protein. | 0.999 |
dhbF_1 | yqjH | DM82_1680 | DM82_3933 | AA-adenyl-dom: amino acid adenylation domain protein. | Siderophore-interacting FAD-binding domain protein. | 0.585 |
dltA | dhbE_2 | DM82_1682 | DM82_4182 | D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1. | Salicyl_syn: salicylate synthase. | 0.977 |
dltA | dhbF_1 | DM82_1682 | DM82_1680 | D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1. | AA-adenyl-dom: amino acid adenylation domain protein. | 0.996 |
dltA | dltA-2 | DM82_1682 | DM82_5237 | D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1. | D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1. | 0.998 |
dltA | lgrD_1 | DM82_1682 | DM82_1817 | D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1. | NRPS-para261: non-ribosomal peptide synthase TIGR01720 domain protein. | 0.999 |
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