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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bdhA_1PHB_DH: 3-hydroxybutyrate dehydrogenase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (261 aa)    
Predicted Functional Partners:
adc_2
Putative acetoacetate decarboxylase; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family.
 
  
  0.984
scoB
pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit.
  
 0.908
DM82_3938
Patatin-like phospholipase family protein.
 
 
   0.902
yngG
HMGL-like family protein.
   
 
  0.901
scoA
pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit.
  
 
 0.901
phaZ2
D-(-)-3-hydroxybutyrate oligomer hydrolase; Participates in the degradation of poly-3-hydroxybutyrate (PHB). It works downstream of poly(3-hydroxybutyrate) depolymerase, hydrolyzing D(-)-3-hydroxybutyrate oligomers of various length (3HB- oligomers) into 3HB-monomers; Belongs to the D-(-)-3-hydroxybutyrate oligomer hydrolase family.
     
 0.900
bdhA_2
PHB_DH: 3-hydroxybutyrate dehydrogenase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 
0.900
lgrD_1
NRPS-para261: non-ribosomal peptide synthase TIGR01720 domain protein.
  
 0.715
tycC_2
AA-adenyl-dom: amino acid adenylation domain protein.
  
 0.715
DM82_6294
Phosphoesterase family protein.
   
 0.649
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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