Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM82_40Hypothetical protein; acyl-CoA dehydrogenase, C-terminal domain protein. (407 aa)    
Predicted Functional Partners:
fadJ_1
enoyl-CoA hydratase/isomerase family protein.
 
 0.985
DM82_41
Aminoacyl carrier protein.
 
  
  0.959
echA8_3
enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.945
pcaF_1
acCoA-C-Actrans: acetyl-CoA C-acetyltransferase family protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.942
paaJ-2
acCoA-C-Actrans: acetyl-CoA C-acetyltransferase family protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.942
DM82_5594
Carboxyl transferase domain protein.
  
 
 0.926
DM82_6347
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
  
  
  0.919
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.918
DM82_3697
Hypothetical protein; acyl-CoA dehydrogenase, C-terminal domain protein.
  
  
  0.918
DM82_39
Amino acid--[acyl-carrier-protein] ligase.
 
 
   0.917
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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