Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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DM82_4004Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (232 aa)    
Predicted Functional Partners:
exbD_4
Biopolymer transport ExbD/TolR family protein.
 
 
 0.965
tolQ_3
motA/TolQ/ExbB proton channel family protein.
 
 
 0.957
exbD_3
Biopolymer transport ExbD/TolR family protein.
 
 
 0.938
DM82_4008
Tetratricopeptide repeat family protein.
 
 
   0.873
DM82_2192
tonB dependent receptor family protein.
 
 
 0.841
cirA_1
tonB dependent receptor family protein.
 
 
 0.830
exbD_2
Biopolymer transport ExbD/TolR family protein.
  
 
 0.826
exbD_5
Biopolymer transport ExbD/TolR family protein.
  
 
 0.826
tolQ_2
motA/TolQ/ExbB proton channel family protein.
 
 
 0.774
tolQ_4
motA/TolQ/ExbB proton channel family protein.
 
 
 0.773
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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