STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyt_2Cytochrome c-551 domain protein. (107 aa)    
Predicted Functional Partners:
DM82_6211
Cytochrome c family protein.
  
  
 
0.914
cyt_1
Cytochrome c family protein.
  
  
 
0.910
yedY_1
Oxidoreductase molybdopterin binding domain protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being a [...]
   
 
 0.601
yedY_2
Oxidoreductase molybdopterin binding domain protein.
   
 
 0.601
DM82_1928
Lactonase, 7-bladed beta-propeller family protein.
  
  
 0.560
DM82_5423
PQQ enzyme repeat family protein.
  
  
 0.560
ilvD
ilvD: dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
       0.503
DM82_4916
Hypothetical protein.
  
     0.502
norB
Cytochrome C and Quinol oxidase polypeptide I family protein.
  
  
 0.495
lvr_1
Short chain dehydrogenase family protein.
  
     0.481
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.