STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM82_426Hypothetical protein. (62 aa)    
Predicted Functional Partners:
scpA
scpA/B family protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
    0.865
DM82_1723
Hypothetical protein; nfeD-like C-terminal, partner-binding family protein.
  
     0.752
DM82_2619
Barstar family protein.
  
     0.741
DM82_5963
Flavinator of succinate dehydrogenase family protein.
  
     0.731
DM82_2844
STAS domain protein.
  
     0.713
DM82_1514
Putative membrane protein.
  
     0.701
DM82_1434
Hypothetical protein.
  
     0.673
DM82_3015
H-NS histone family protein.
  
     0.673
DM82_2263
Transglycosylase SLT domain protein.
  
    0.672
DM82_3673
ATP synthase A chain family protein.
  
     0.667
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.