Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM82_4287N-formylglutamate amidohydrolase. (302 aa)    
Predicted Functional Partners:
hutI
hutI: imidazolonepropionase.
  
  
 0.851
kdgR_6
Bacterial transcriptional regulator family protein.
       0.785
DM82_4285
C4-dicarboxylate anaerobic carrier family protein.
       0.760
hutF
hutF: formiminoglutamate deiminase.
  
 
 0.637
DM82_862
Amidohydrolase family protein.
  
  
 0.610
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.570
hutH
hutH: histidine ammonia-lyase.
  
  
 0.510
hutH_2
Aromatic amino acid lyase family protein.
  
  
 0.510
DM82_641
Hypothetical protein.
 
     0.465
proV
proV: glycine betaine/L-proline transport ATP binding subunit.
  
    0.429
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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