Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM82_4302Acetyltransferase domain protein. (156 aa)    
Predicted Functional Partners:
ydfH_2
Bacterial regulatory s, gntR family protein.
     
 0.590
gltP
Sodium:dicarboxylate symporter family protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.586
lgrD_1
NRPS-para261: non-ribosomal peptide synthase TIGR01720 domain protein.
     
 0.546
tycC_2
AA-adenyl-dom: amino acid adenylation domain protein.
     
 0.546
pcp-3
Pseudomonalisin.
  
     0.487
DM82_317
Hypothetical protein.
  
     0.468
DM82_4554
Copper resistance D family protein.
  
     0.450
lsdA
Levansucrase; Belongs to the glycosyl hydrolase 68 family.
  
     0.448
bcsE
cellulose_bcsE: cellulose biosynthesis protein BcsE.
  
     0.440
pcp-2
Pseudomonalisin.
  
     0.440
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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