Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
yghZ_2Putative voltage-gated potassium channel subunit beta. (323 aa)    
Predicted Functional Partners:
dkgB
Aldo/keto reductase family protein.
 
 
0.558
rlmJ
Ribosomal RNA small subunit methyltransferase D, RsmJ family protein; Specifically methylates the adenine in position 2030 of 23S rRNA.
       0.554
yhdN_1
Aldo/keto reductase family protein.
 
 
0.529
bdhA_2
PHB_DH: 3-hydroxybutyrate dehydrogenase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
   0.517
lgrD_1
NRPS-para261: non-ribosomal peptide synthase TIGR01720 domain protein.
   
 0.430
tycC_2
AA-adenyl-dom: amino acid adenylation domain protein.
   
 0.430
hflB-2
ftsH_fam: ATP-dependent metallopeptidase HflB family protein; Belongs to the AAA ATPase family.
    
 
 0.416
gla
MIP: MIP channel s family protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.415
aqpZ2
MIP channel s family protein; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.415
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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