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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM82_4495Hypothetical protein. (480 aa)    
Predicted Functional Partners:
DM82_4496
SLBB domain protein.
       0.554
DM82_4497
Chain length determinant family protein.
       0.554
rfbF
G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase.
       0.554
rfbG
CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase.
       0.554
ddhC
CDP-4-keto-6-deoxy-D-glucose-3-dehydrase.
       0.554
DM82_4501
Perosamine synthetase domain protein.
       0.550
DM82_4502
Polysaccharide biosynthesis family protein.
       0.550
DM82_4503
Glycosyl transferase 2 family protein.
       0.529
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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