Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
puuC_1Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family. (479 aa)    
Predicted Functional Partners:
bphJ
Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
    
 0.933
DM82_6209
Adh_fam_2: zinc-binding alcohol dehydrogenase family protein.
  
 0.925
DM82_6236
Zinc-binding dehydrogenase family protein.
  
 0.925
gabT-2
GABAtrnsam: 4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.922
mmsA-2
MMSDH: methylmalonate-semialdehyde dehydrogenase.
  
  
 
0.919
mmsA
MMSDH: methylmalonate-semialdehyde dehydrogenase.
  
  
 
0.918
mmsA-3
MMSDH: methylmalonate-semialdehyde dehydrogenase.
  
  
 
0.917
speB-2
Agmatinase: agmatinase; Belongs to the arginase family.
  
 0.917
flhA_2
adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 0.914
prr
Gamma-aminobutyraldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.914
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
Server load: low (22%) [HD]