Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DM82_4534HD domain protein. (213 aa)    
Predicted Functional Partners:
fac-dex
Alpha/beta hydrolase fold family protein.
  
     0.620
DM82_5518
Methyltransferase, family protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
  
     0.609
DM82_4536
Alginate export family protein.
 
     0.604
DM82_1560
Zinc-finger family protein.
  
     0.517
DM82_4700
Sulfite exporter TauE/SafE family protein.
  
     0.507
DM82_4535
Glyoxalase-like domain protein.
       0.506
DM82_338
Alpha/beta hydrolase fold family protein.
  
     0.473
phoP_3
NB-ARC domain protein.
  
     0.454
DM82_6063
Tautomerase enzyme family protein.
  
     0.452
gltB_2
Glutamine amidotransferases class-II family protein.
       0.440
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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