Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
bclA_3AMP-binding enzyme family protein. (540 aa)    
Predicted Functional Partners:
andAa
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein.
  
 
  0.903
andAd
Ring hydroxylating beta subunit.
     
 0.901
andAc
Ring hydroxylating alpha subunit family protein.
     
 0.901
andAb_2
Rieske [2Fe-2S] domain protein.
     
  0.900
DM82_4588
Metallo-beta-lactamase superfamily protein.
 
 
 0.654
DM82_4589
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
  
 0.611
kynA
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
 
   
 0.606
fabH_3
FAE1/Type III polyketide synthase-like family protein.
  
 
 0.600
pqsD
PQB biosynthetic 3-oxoacyl-[acyl-carrier-protein] synthase III; Belongs to the thiolase-like superfamily. FabH family.
  
 
 0.600
fabH_2
3-Oxoacyl-[acyl-carrier-(ACP)] synthase III family protein.
  
 
 0.597
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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