Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
btr_2Helix-turn-helix domain protein. (332 aa)    
Predicted Functional Partners:
DM82_5977
DJ-1/PfpI family protein.
 
     0.769
DM82_6367
DJ-1/PfpI family protein.
  
     0.756
DM82_4608
thiJ/PfpI family protein.
 
     0.740
DM82_4595
HD domain protein.
 
     0.680
adaA
Helix-turn-helix domain protein.
  
   0.505
DM82_4577
Helix-turn-helix domain protein.
  
   0.496
melR_2
Helix-turn-helix domain protein.
  
   0.441
ahpC
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
       0.413
araC_1
Helix-turn-helix domain protein.
  
   0.401
rhaR_2
Helix-turn-helix domain protein.
  
   0.400
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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