Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM82_46142OG-Fe(II) oxygenase superfamily protein. (257 aa)    
Predicted Functional Partners:
DM82_4613
hpnL: membrane family protein.
 
  
 0.968
DM82_4615
CDP-alcohol phosphatidyltransferase family protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.966
DM82_4612
Nucleotidyl transferase family protein.
 
     0.948
aepY
ppyr-DeCO2ase: phosphonopyruvate decarboxylase.
 
   
 0.927
aepX-2
PEP_mutase: phosphoenolpyruvate phosphomutase.
 
 
 0.867
phnW_2
2-aminoethylphosphonate aminotransferase family protein; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
 
     0.836
rodZ
Helix-turn-helix domain protein.
  
    0.799
DM82_458
Gram-negative porin family protein.
  
     0.744
DM82_176
O-Antigen ligase family protein.
 
     0.659
DM82_3128
ATP synthase I chain family protein.
  
     0.630
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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