Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DM82_4623Hypothetical protein. (329 aa)    
Predicted Functional Partners:
DM82_4625
vgr_GE: Rhs element Vgr family protein.
 
  
 0.953
DM82_4622
Hypothetical protein.
 
  
 0.952
DM82_4617
impA-related N-terminal family protein.
 
  
 0.921
hcp1_2
Hypothetical protein.
 
  
 0.897
DM82_3757
impA-related N-terminal family protein.
 
  
 0.892
DM82_4626
vgr_GE: Rhs element Vgr family protein.
 
  
 0.890
DM82_4618
Hypothetical protein.
 
  
 0.866
DM82_4619
Hypothetical protein.
 
  
 0.865
DM82_4988
impA-related N-terminal family protein.
 
  
 0.861
DM82_4632
Hypothetical protein.
 
  
 0.854
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.