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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sacCHypothetical protein; Glycosyl hydrolases family 32 N-terminal domain protein; Belongs to the glycosyl hydrolase 32 family. (549 aa)    
Predicted Functional Partners:
fruA
PTS system fructose-specific EIIBC component.
  
 
 0.948
DM82_3540
pfkB carbohydrate kinase family protein.
 
 
 0.947
iolC_2
Hypothetical protein.
  
 
 0.916
mtlK
Mannitol dehydrogenase Rossmann domain protein.
     
 0.913
lsdA
Levansucrase; Belongs to the glycosyl hydrolase 68 family.
 
   
 0.885
nagE
PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component.
 
  
 0.787
ptsP-2
PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase; Belongs to the PEP-utilizing enzyme family.
  
  
 0.538
lacC
1-PFK: hexose kinase, 1-phosphofructokinase family protein; Belongs to the carbohydrate kinase PfkB family.
 
   
 0.525
pfkB
Putative phosphofructokinase pfkB; Belongs to the carbohydrate kinase PfkB family.
  
   
 0.525
DM82_533
Lactonase, 7-bladed beta-propeller family protein.
  
     0.514
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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