Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lsdALevansucrase; Belongs to the glycosyl hydrolase 68 family. (506 aa)    
Predicted Functional Partners:
bglB
Hypothetical protein; Glycosyl hydrolase family 3 C-terminal domain protein.
  
 
  0.920
sacC
Hypothetical protein; Glycosyl hydrolases family 32 N-terminal domain protein; Belongs to the glycosyl hydrolase 32 family.
 
   
 0.901
DM82_317
Hypothetical protein.
  
     0.751
bcsE
cellulose_bcsE: cellulose biosynthesis protein BcsE.
  
     0.750
DM82_1424
Hypothetical protein.
  
     0.745
nagE
PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component.
 
  
 0.742
DM82_4554
Copper resistance D family protein.
  
     0.740
DM82_4008
Tetratricopeptide repeat family protein.
  
   
 0.702
DM82_5142
Membrane bound FAD containing D-sorbitol dehydrogenase family protein.
  
     0.694
DM82_1625
Gram-negative porin family protein.
  
     0.690
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.