STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etfA_3Electron transfer flavodomain protein. (390 aa)    
Predicted Functional Partners:
DM82_4657
Electron transfer flavodomain protein.
 
 0.996
DM82_982
FAD binding domain protein; Accepts electrons from ETF and reduces ubiquinone.
 
 0.996
etfB
Electron transfer flavodomain protein.
 
 0.991
DM82_4655
4Fe-4S dicluster domain protein.
 
  
 0.946
DM82_4654
NADH:flavin oxidoreductase / NADH oxidase family protein.
 
 
 0.918
DM82_4589
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
 
 
 0.870
DM82_4712
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
 
 0.827
DM82_4653
V4R domain protein.
 
    0.821
fadH_1
NADH:flavin oxidoreductase / NADH oxidase family protein.
   
 
 0.813
fadH_2
NADH:flavin oxidoreductase / NADH oxidase family protein.
   
 
 0.813
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.