STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompR_2Hypothetical protein; Transcriptional regulatory, C terminal family protein. (241 aa)    
Predicted Functional Partners:
envZ_2
HAMP domain protein.
 
 0.997
envZ_1
Putative oxidative stress related two component system, sensor kinase.
 
 0.985
zraS_3
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein.
 
 
 0.965
evgS
Response regulator.
 
 0.941
arcB_4
Sensory box protein.
 
 0.940
rcsC_1
Response regulator.
 
 
 0.916
ompR
Transcriptional regulatory protein ompR.
  
  
 
0.903
cpxA
Response regulator.
 
 
 0.827
cusS_3
Heavy metal sensor kinase family protein; Member of a two-component regulatory system.
 
 0.823
cusS_2
Heavy metal sensor kinase family protein; Member of a two-component regulatory system.
 
 0.817
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.