Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tfdATaurine catabolism dioxygenase TauD, TfdA family protein. (283 aa)    
Predicted Functional Partners:
aepY-2
ppyr-DeCO2ase: phosphonopyruvate decarboxylase.
  
   0.797
aepX-3
PEP_mutase: phosphoenolpyruvate phosphomutase.
  
   0.794
lgrD_1
NRPS-para261: non-ribosomal peptide synthase TIGR01720 domain protein.
 
  
 0.752
tycC_2
AA-adenyl-dom: amino acid adenylation domain protein.
  
  
 0.713
phnY-2
phnAcAld_DH: putative phosphonoacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
   0.685
tauA
taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein.
 
  
 0.581
ssuB_4
ABC transporter family protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.
  
    0.557
ssuC_1
Binding--dependent transport system inner membrane component family protein.
 
  
 0.513
dltA-2
D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1.
 
  
 0.499
dhbF_3
Thioesterase domain protein.
 
  
 0.460
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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