Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ssuD_3Luciferase-like monooxygenase family protein. (361 aa)    
Predicted Functional Partners:
tauD_2
Taurine catabolism dioxygenase TauD, TfdA family protein.
 
 
  0.930
ssuA_4
NMT1-like family protein.
 
 
 0.929
ssuA_2
ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.
 
 
 0.924
sfnG
LLM_DMSO2_sfnG: dimethyl sulfone monooxygenase SfnG.
  
  
 
0.923
azo1
NADPH-dependent FMN reductase family protein.
  
 0.921
ssuA_1
ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.
 
 
 0.920
ssuD
Alkanesulfonate monooxygenase, FMNH(2)-dependent; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
 
  
 
0.917
ssuA_3
ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.
 
 
 0.913
DM82_5639
Flavodoxin family protein.
     
 0.906
sir_2
Nitrite and sulphite reductase 4Fe-4S domain protein.
     
 0.903
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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