Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
citTCitrate transporter family protein. (451 aa)    
Predicted Functional Partners:
kshA_1
Ring hydroxylating alpha subunit family protein.
 
     0.825
ophA1_1
2Fe-2S iron-sulfur cluster binding domain protein.
     
 0.704
fumB
Hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.659
maeB_1
Malic enzyme, NAD binding domain protein.
  
  
 0.545
maeB
NADP-dependent malic enzyme; Belongs to the malic enzymes family.
  
  
 0.545
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
  
  
 0.532
cysC-2
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
  
  
 0.532
nagE
PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component.
  
  
 0.500
DM82_4894
Helix-turn-helix family protein.
  
     0.488
invG_2
type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family.
  
     0.480
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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