Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM82_1089 | DM82_1657 | DM82_1089 | DM82_1657 | Putative membrane protein. | Tetratricopeptide repeat family protein. | 0.772 |
DM82_1089 | DM82_176 | DM82_1089 | DM82_176 | Putative membrane protein. | O-Antigen ligase family protein. | 0.741 |
DM82_1089 | DM82_183 | DM82_1089 | DM82_183 | Putative membrane protein. | snoaL-like domain protein. | 0.708 |
DM82_1089 | DM82_2411 | DM82_1089 | DM82_2411 | Putative membrane protein. | EAL domain protein. | 0.702 |
DM82_1089 | DM82_5111 | DM82_1089 | DM82_5111 | Putative membrane protein. | opgC family protein. | 0.675 |
DM82_1089 | DM82_553 | DM82_1089 | DM82_553 | Putative membrane protein. | PRC-barrel domain protein. | 0.755 |
DM82_1089 | DM82_5951 | DM82_1089 | DM82_5951 | Putative membrane protein. | Putative transmembrane protein. | 0.547 |
DM82_1089 | gspL | DM82_1089 | DM82_3173 | Putative membrane protein. | typeII_sec_gspL: type II secretion system protein L. | 0.711 |
DM82_1089 | tetA_1 | DM82_1089 | DM82_552 | Putative membrane protein. | lacY proton/sugar symporter family protein. | 0.505 |
DM82_1657 | DM82_1089 | DM82_1657 | DM82_1089 | Tetratricopeptide repeat family protein. | Putative membrane protein. | 0.772 |
DM82_1657 | DM82_176 | DM82_1657 | DM82_176 | Tetratricopeptide repeat family protein. | O-Antigen ligase family protein. | 0.770 |
DM82_1657 | DM82_183 | DM82_1657 | DM82_183 | Tetratricopeptide repeat family protein. | snoaL-like domain protein. | 0.737 |
DM82_1657 | DM82_2411 | DM82_1657 | DM82_2411 | Tetratricopeptide repeat family protein. | EAL domain protein. | 0.755 |
DM82_1657 | DM82_5111 | DM82_1657 | DM82_5111 | Tetratricopeptide repeat family protein. | opgC family protein. | 0.743 |
DM82_1657 | DM82_553 | DM82_1657 | DM82_553 | Tetratricopeptide repeat family protein. | PRC-barrel domain protein. | 0.769 |
DM82_1657 | DM82_5951 | DM82_1657 | DM82_5951 | Tetratricopeptide repeat family protein. | Putative transmembrane protein. | 0.710 |
DM82_1657 | gspL | DM82_1657 | DM82_3173 | Tetratricopeptide repeat family protein. | typeII_sec_gspL: type II secretion system protein L. | 0.764 |
DM82_1657 | tetA_1 | DM82_1657 | DM82_552 | Tetratricopeptide repeat family protein. | lacY proton/sugar symporter family protein. | 0.546 |
DM82_176 | DM82_1089 | DM82_176 | DM82_1089 | O-Antigen ligase family protein. | Putative membrane protein. | 0.741 |
DM82_176 | DM82_1657 | DM82_176 | DM82_1657 | O-Antigen ligase family protein. | Tetratricopeptide repeat family protein. | 0.770 |
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