Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
chaASodium/calcium exchanger family protein. (362 aa)    
Predicted Functional Partners:
DM82_2636
Hypothetical protein.
    
 
 0.529
amiD_2
N-acetylmuramoyl-L-alanine amidase family protein.
  
     0.509
yihY
yihY_not_rbn: YihY family inner membrane domain protein.
  
    0.475
yihY-2
yihY_not_rbn: YihY family inner membrane domain protein.
  
    0.475
amiD_3
N-acetylmuramoyl-L-alanine amidase family protein.
  
     0.466
marC_2
marC integral membrane family protein.
       0.462
gatm
Glycine amidinotransferase, mitochondrial.
   
    0.460
amiD
N-acetylmuramoyl-L-alanine amidase AmiD.
  
     0.437
amiD_4
N-acetylmuramoyl-L-alanine amidase family protein.
  
     0.436
yccA
Inhibitor of apoptosis-promoting Bax1 family protein; Belongs to the BI1 family.
   
  
 0.432
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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