Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DM82_5165Hypothetical protein. (273 aa)    
Predicted Functional Partners:
DM82_5164
Hypothetical protein; Belongs to the UPF0276 family.
 
  
 0.996
DM82_5163
Hypothetical protein.
 
  
 0.983
DM82_5166
doxX family protein.
 
  
 0.979
DM82_5167
Hypothetical protein.
 
     0.712
DM82_421
doxX family protein.
  
  
 0.584
yphA
Inner membrane protein yphA.
  
  
 0.584
yphA-2
Inner membrane protein yphA.
  
  
 0.584
DM82_5161
Hypothetical protein.
     
 0.569
cnrH
sigma70-ECF: RNA polymerase sigma factor, sigma-70 family protein.
  
    0.536
DM82_16
Alkylhydroperoxidase AhpD family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
   
  
 0.498
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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