Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM82_5253Bacterial capsule synthesis PGA_cap family protein. (356 aa)    
Predicted Functional Partners:
pncB-2
Nicotinate phosphoribosyltransferase family protein; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
 
    0.805
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
  
    0.757
DM82_149
Dienelactone hydrolase.
 
    0.756
DM82_151
Phosphoribosyl transferase domain protein.
 
    0.629
polX
PHP domain protein.
 
     0.613
DM82_148
Erythromycin esterase family protein.
  
     0.603
rtcB
tRNA-splicing ligase RtcB family protein; Belongs to the RtcB family.
 
     0.567
DM82_2967
mut7-C ubiquitin family protein.
 
     0.562
DM82_18
Hypothetical protein.
  
     0.552
DM82_5254
GYD domain protein.
 
     0.543
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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