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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM82_5274Pyridine nucleotide-disulfide oxidoreductase family protein. (612 aa)    
Predicted Functional Partners:
DM82_2762
Hypothetical protein.
  
     0.707
gatm
Glycine amidinotransferase, mitochondrial.
  
   
 0.677
DM82_2636
Hypothetical protein.
    
 
 0.568
bioC_2
ubiE/COQ5 methyltransferase family protein.
  
     0.561
nat
Arylamine N-acetyltransferase; Belongs to the arylamine N-acetyltransferase family.
  
     0.527
lgrD_1
NRPS-para261: non-ribosomal peptide synthase TIGR01720 domain protein.
  
  
 0.503
tycC_2
AA-adenyl-dom: amino acid adenylation domain protein.
  
  
 0.503
DM82_5275
Hypothetical protein.
       0.501
dehH1_1
Alpha/beta hydrolase fold family protein.
  
   0.492
speB-2
Agmatinase: agmatinase; Belongs to the arginase family.
  
     0.447
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.