Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
fadH_1NADH:flavin oxidoreductase / NADH oxidase family protein. (673 aa)    
Predicted Functional Partners:
gltB_2
Glutamine amidotransferases class-II family protein.
  
 
 0.999
gltB_1
Hypothetical protein; Conserved region in glutamate synthase family protein; Belongs to the glutamate synthase family.
 
 
 0.948
ascD
2Fe-2S iron-sulfur cluster binding domain protein.
  
 0.930
DM82_4657
Electron transfer flavodomain protein.
  
 
 0.892
thcB
Cytochrome domain protein; P450 116; Belongs to the cytochrome P450 family.
   
 0.891
etfB
Electron transfer flavodomain protein.
  
 
 0.884
narH
narH: nitrate reductase, beta subunit.
    
 
 0.840
DM82_1352
Pyruvate ferredoxin/flavodoxin oxidoreductase family protein.
   
 
 0.820
DM82_2955
Hypothetical protein; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein.
   
 
 0.820
DM82_3570
Hypothetical protein; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein.
   
 
 0.820
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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