STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DM82_535META domain protein. (182 aa)    
Predicted Functional Partners:
macB_1
ABC transporter family protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
   
   0.823
DM82_1377
SMP-30/Gluconolaconase/LRE-like region family protein.
 
     0.698
DM82_3964
Initiator Replication family protein.
 
     0.692
DM82_3766
Transglutaminase-like superfamily protein.
  
     0.691
DM82_3793
SMP-30/Gluconolaconase/LRE-like region family protein.
 
     0.687
DM82_6103
O-antigen ligase like membrane family protein.
  
     0.662
DM82_5934
Polysaccharide biosynthesis family protein.
  
     0.659
DM82_1777
AIG2-like family protein.
  
     0.655
DM82_2168
Hypothetical protein.
  
     0.642
DM82_1398
LTXXQ motif family protein.
  
     0.624
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.