Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM82_5426Terpene synthase family, metal binding domain protein. (366 aa)    
Predicted Functional Partners:
DM82_1382
FAD binding domain protein.
  
     0.558
ispA_1
Polyprenyl synthetase family protein; Belongs to the FPP/GGPP synthase family.
     
 0.521
DM82_26
Cyclo_dehyd_2: bacteriocin biosynthesis cyclodehydratase domain.
  
     0.518
ydiA
Kinase/pyrophosphorylase family protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.
  
  
 0.505
gltB_2
Glutamine amidotransferases class-II family protein.
     
 0.499
DM82_5424
FAD dependent oxidoreductase family protein.
  
     0.486
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.484
DM82_6282
Ferritin-like family protein.
  
     0.472
fosA
glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein.
  
     0.460
DM82_3105
Transcriptional regulator PadR-like family protein.
 
     0.459
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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