Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
rfaQ_1Glycosyltransferase 9 family protein. (381 aa)    
Predicted Functional Partners:
DM82_4504
Glycosyltransferase 9 family protein.
 
  
 0.866
pimA_2
Glycosyl transferases group 1 family protein.
 
  
 0.846
rfaE-2
Bifunctional protein RfaE; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.
 
   
 0.816
rfaE
Domain I; rfaE_dom_I: bifunctional protein RfaE, domain I.
 
   
 0.808
DM82_546
O-Antigen ligase family protein.
  
  
 0.801
DM82_4505
Glycosyltransferase 9 family protein.
 
  
 0.793
gmhA
SIS domain protein.
 
   
 0.771
rfaC
heptsyl_trn_I: lipopolysaccharide heptosyltransferase I.
  
     0.739
gmhB
HAD-SF-IIIA: HAD hydrolase, family IIIA domain protein.
 
   
 0.738
rfaC-2
heptsyl_trn_I: lipopolysaccharide heptosyltransferase I.
  
     0.729
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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