Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
DM82_5531Rhodanese-like domain protein. (155 aa)    
Predicted Functional Partners:
mmpI
Major membrane protein I.
 
    0.627
DM82_5529
Helix-turn-helix family protein.
  
    0.612
baeB
Metallo-beta-lactamase superfamily protein.
 
 
 0.604
lgrD_1
NRPS-para261: non-ribosomal peptide synthase TIGR01720 domain protein.
  
 
 0.595
tycC_2
AA-adenyl-dom: amino acid adenylation domain protein.
  
 
 0.595
DM82_4887
Acyltransferase family protein.
  
   0.592
cysE_3
Bacterial transferase hexapeptide family protein.
  
    0.590
sufS-2
sufS: cysteine desulfurase, SufS family protein; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.573
DM82_4589
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
   
 
 0.571
DM82_5534
Hypothetical protein; Prolyl oligopeptidase, N-terminal beta-propeller domain protein.
 
   
 0.566
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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