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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yihXHAD-SF-IA-v3: HAD hydrolase, IA, variant 3 family protein. (204 aa)    
Predicted Functional Partners:
algC
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein.
  
 
 0.904
glk
Glk: glucokinase; Belongs to the bacterial glucokinase family.
  
 
  0.903
DM82_2627
Aldose 1-epimerase family protein.
   
 
  0.902
rfbF
G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase.
    
  0.805
galU
galU: UTP-glucose-1-phosphate uridylyltransferase.
    
  0.802
galU-2
galU: UTP-glucose-1-phosphate uridylyltransferase.
    
  0.802
galU-3
galU: UTP-glucose-1-phosphate uridylyltransferase.
    
  0.802
DM82_4700
Sulfite exporter TauE/SafE family protein.
 
     0.533
DM82_2250
Hypothetical protein.
  
     0.506
lutR
Bacterial regulatory s, gntR family protein.
       0.501
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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