Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM82_4892 | DM82_5654 | DM82_4892 | DM82_5654 | Fluoroacetate dehalogenase. | eamA-like transporter family protein. | 0.434 |
DM82_5653 | DM82_5654 | DM82_5653 | DM82_5654 | Hypothetical protein. | eamA-like transporter family protein. | 0.554 |
DM82_5653 | nadE-2 | DM82_5653 | DM82_5655 | Hypothetical protein. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.417 |
DM82_5654 | DM82_4892 | DM82_5654 | DM82_4892 | eamA-like transporter family protein. | Fluoroacetate dehalogenase. | 0.434 |
DM82_5654 | DM82_5653 | DM82_5654 | DM82_5653 | eamA-like transporter family protein. | Hypothetical protein. | 0.554 |
DM82_5654 | nadE-2 | DM82_5654 | DM82_5655 | eamA-like transporter family protein. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | 0.589 |
DM82_5654 | yhjX | DM82_5654 | DM82_4065 | eamA-like transporter family protein. | Major Facilitator Superfamily protein. | 0.473 |
nadE-2 | DM82_5653 | DM82_5655 | DM82_5653 | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | Hypothetical protein. | 0.417 |
nadE-2 | DM82_5654 | DM82_5655 | DM82_5654 | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family. | eamA-like transporter family protein. | 0.589 |
yhjX | DM82_5654 | DM82_4065 | DM82_5654 | Major Facilitator Superfamily protein. | eamA-like transporter family protein. | 0.473 |