Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM82_5673Fatty acid desaturase family protein. (393 aa)    
Predicted Functional Partners:
coq7
Ubiquinone biosynthesis COQ7 family protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
  
 
   0.550
DM82_5674
Glycine zipper 2TM domain protein.
       0.542
lgrD_1
NRPS-para261: non-ribosomal peptide synthase TIGR01720 domain protein.
  
 0.533
tycC_2
AA-adenyl-dom: amino acid adenylation domain protein.
  
 0.533
bacD
ATP-grasp domain protein.
   
 
 0.503
ppsE_2
AMP-binding enzyme family protein.
  
 
 0.490
pksM
Thioester-redct: thioester reductase domain protein.
   
 
 0.457
DM82_526
Hypothetical protein.
  
     0.431
DM82_185
Zinc-finger domain protein.
  
     0.428
thcB
Cytochrome domain protein; P450 116; Belongs to the cytochrome P450 family.
  
 0.415
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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