Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DM82_56902OG-Fe(II) oxygenase superfamily protein. (260 aa)    
Predicted Functional Partners:
DM82_5688
Hypothetical protein.
 
     0.588
pitA_3
Phosphate transporter family protein.
       0.568
ada
Bifunctional transcriptional activator/DNA repair enzyme Ada; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. Belongs to the MGMT family.
 
     0.565
DM82_751
Hypothetical protein.
  
     0.553
DM82_4889
Hypothetical protein; Domain of unknown function family protein.
  
     0.486
DM82_4872
glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein.
  
     0.453
DM82_554
Alkylhydroperoxidase AhpD family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
     0.440
feuC_1
fecCD transport family protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
   
    0.433
DM82_410
fecCD transport family protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
   
    0.433
feuC_2
fecCD transport family protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
   
    0.433
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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