ssuB_4 protein (Burkholderia oklahomensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ssuB_4

ABC transporter family protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family. (260 aa)

Predicted Functional Partners:

DM82_5695

0.999

tauA

0.999

tauD_2

0.975

ssuC_2

0.951

ssuC_3

0.946

ssuC_1

0.901

cmpB_4

0.873

cmpB_3

0.831

ssuA_3

0.656

ssuA_2

0.639

Your Current Organism:

Burkholderia oklahomensis

NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DM82_5695	ssuA_2	DM82_5695	DM82_4790	Binding--dependent transport system inner membrane component family protein.	ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.	0.876
DM82_5695	ssuA_3	DM82_5695	DM82_5097	Binding--dependent transport system inner membrane component family protein.	ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.	0.883
DM82_5695	ssuB_4	DM82_5695	DM82_5696	Binding--dependent transport system inner membrane component family protein.	ABC transporter family protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.	0.999
DM82_5695	ssuC_1	DM82_5695	DM82_1091	Binding--dependent transport system inner membrane component family protein.	Binding--dependent transport system inner membrane component family protein.	0.425
DM82_5695	tauA	DM82_5695	DM82_5697	Binding--dependent transport system inner membrane component family protein.	taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein.	0.999
DM82_5695	tauD_2	DM82_5695	DM82_5698	Binding--dependent transport system inner membrane component family protein.	Taurine catabolism dioxygenase TauD, TfdA family protein.	0.961
cmpB_3	ssuA_2	DM82_4792	DM82_4790	Binding--dependent transport system inner membrane component family protein.	ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.	0.880
cmpB_3	ssuA_3	DM82_4792	DM82_5097	Binding--dependent transport system inner membrane component family protein.	ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.	0.862
cmpB_3	ssuB_4	DM82_4792	DM82_5696	Binding--dependent transport system inner membrane component family protein.	ABC transporter family protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.	0.831
cmpB_3	tauA	DM82_4792	DM82_5697	Binding--dependent transport system inner membrane component family protein.	taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein.	0.731
cmpB_4	ssuA_2	DM82_4582	DM82_4790	Binding--dependent transport system inner membrane component family protein.	ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.	0.862
cmpB_4	ssuA_3	DM82_4582	DM82_5097	Binding--dependent transport system inner membrane component family protein.	ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.	0.856
cmpB_4	ssuB_4	DM82_4582	DM82_5696	Binding--dependent transport system inner membrane component family protein.	ABC transporter family protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.	0.873
cmpB_4	tauA	DM82_4582	DM82_5697	Binding--dependent transport system inner membrane component family protein.	taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein.	0.835
ssuA_2	DM82_5695	DM82_4790	DM82_5695	ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.	Binding--dependent transport system inner membrane component family protein.	0.876
ssuA_2	cmpB_3	DM82_4790	DM82_4792	ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.	Binding--dependent transport system inner membrane component family protein.	0.880
ssuA_2	cmpB_4	DM82_4790	DM82_4582	ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.	Binding--dependent transport system inner membrane component family protein.	0.862
ssuA_2	ssuA_3	DM82_4790	DM82_5097	ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.	ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.	0.917
ssuA_2	ssuB_4	DM82_4790	DM82_5696	ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.	ABC transporter family protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.	0.639
ssuA_2	ssuC_1	DM82_4790	DM82_1091	ssuA_fam: ABC transporter, substrate-binding, aliphatic sulfonates family protein.	Binding--dependent transport system inner membrane component family protein.	0.933

page 1 of 4

Server load: low (24%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About