Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM82_2507 | DM82_3595 | DM82_2507 | DM82_3595 | Hypothetical protein. | Sporulation related domain protein. | 0.766 |
DM82_2507 | DM82_3751 | DM82_2507 | DM82_3751 | Hypothetical protein. | Lipopolysaccharide-assembly, LptC-related family protein. | 0.766 |
DM82_2507 | DM82_67 | DM82_2507 | DM82_67 | Hypothetical protein. | SCP-2 sterol transfer family protein. | 0.760 |
DM82_2507 | bioC_3 | DM82_2507 | DM82_3666 | Hypothetical protein. | ubiE/COQ5 methyltransferase family protein; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. | 0.565 |
DM82_2507 | lptA | DM82_2507 | DM82_3750 | Hypothetical protein. | Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. | 0.734 |
DM82_3595 | DM82_2507 | DM82_3595 | DM82_2507 | Sporulation related domain protein. | Hypothetical protein. | 0.766 |
DM82_3595 | DM82_3751 | DM82_3595 | DM82_3751 | Sporulation related domain protein. | Lipopolysaccharide-assembly, LptC-related family protein. | 0.713 |
DM82_3595 | DM82_67 | DM82_3595 | DM82_67 | Sporulation related domain protein. | SCP-2 sterol transfer family protein. | 0.765 |
DM82_3595 | lptA | DM82_3595 | DM82_3750 | Sporulation related domain protein. | Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. | 0.679 |
DM82_3751 | DM82_2507 | DM82_3751 | DM82_2507 | Lipopolysaccharide-assembly, LptC-related family protein. | Hypothetical protein. | 0.766 |
DM82_3751 | DM82_3595 | DM82_3751 | DM82_3595 | Lipopolysaccharide-assembly, LptC-related family protein. | Sporulation related domain protein. | 0.713 |
DM82_3751 | DM82_67 | DM82_3751 | DM82_67 | Lipopolysaccharide-assembly, LptC-related family protein. | SCP-2 sterol transfer family protein. | 0.731 |
DM82_3751 | bioC_3 | DM82_3751 | DM82_3666 | Lipopolysaccharide-assembly, LptC-related family protein. | ubiE/COQ5 methyltransferase family protein; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. | 0.474 |
DM82_3751 | lptA | DM82_3751 | DM82_3750 | Lipopolysaccharide-assembly, LptC-related family protein. | Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. | 0.997 |
DM82_67 | DM82_2507 | DM82_67 | DM82_2507 | SCP-2 sterol transfer family protein. | Hypothetical protein. | 0.760 |
DM82_67 | DM82_3595 | DM82_67 | DM82_3595 | SCP-2 sterol transfer family protein. | Sporulation related domain protein. | 0.765 |
DM82_67 | DM82_3751 | DM82_67 | DM82_3751 | SCP-2 sterol transfer family protein. | Lipopolysaccharide-assembly, LptC-related family protein. | 0.731 |
DM82_67 | bioC_3 | DM82_67 | DM82_3666 | SCP-2 sterol transfer family protein. | ubiE/COQ5 methyltransferase family protein; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. | 0.732 |
DM82_67 | lptA | DM82_67 | DM82_3750 | SCP-2 sterol transfer family protein. | Lipopolysaccharide transport periplasmic protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. | 0.712 |
DM82_67 | tpm | DM82_67 | DM82_69 | SCP-2 sterol transfer family protein. | Thiopurine S-methyltransferase family protein. | 0.795 |
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