STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Patl_2425PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: cps:CPS_4865 xanthine dehydrogenase, molybdopterin binding subunit. (784 aa)    
Predicted Functional Partners:
Patl_2424
PFAM: ferredoxin molybdopterin dehydrogenase, FAD-binding [2Fe-2S]-binding CO dehydrogenase flavoprotein-like; KEGG: ppr:PBPRA2243 putative xanthine dehydrogenase, XdhA subunit.
 0.999
Patl_2426
Molybdenum cofactor sulfurylase; PFAM: protein of unknown function DUF182; KEGG: cps:CPS_4866 putative xanthine dehydrogenase accessory protein XdhC.
 
 
 0.990
Patl_2429
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
 
 0.988
Patl_2511
(2Fe-2S)-binding protein; PFAM: ferredoxin [2Fe-2S]-binding; KEGG: ccr:CC0022 isoquinoline 1-oxidoreductase, alpha subunit.
 
     0.946
Patl_2601
(2Fe-2S)-binding protein; PFAM: ferredoxin [2Fe-2S]-binding; KEGG: mlo:mll3837 isoquinoline 1-oxidoreductase, alpha subunit.
 
     0.944
Patl_2390
Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.
 
  
 0.920
Patl_3679
(2Fe-2S)-binding protein; PFAM: ferredoxin [2Fe-2S]-binding; KEGG: bja:blr0840 putative aldehyde dehydrogenase subunit III.
 
     0.910
Patl_2420
Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.
    
 0.909
Patl_2428
PFAM: Transthyretin; KEGG: sme:SMb21285 conserved hypothetical protein, transthyretin-like protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
  
 0.908
Patl_0095
PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: ath:At2g36310 inosine-uridine preferring nucleoside hydrolase family protein; Belongs to the IUNH family.
   
  0.906
Your Current Organism:
Pseudoalteromonas atlantica
NCBI taxonomy Id: 342610
Other names: P. atlantica T6c, Pseudoalteromonas atlantica T6c, Pseudoalteromonas atlantica str. T6c, Pseudoalteromonas atlantica strain T6c
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