Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Patl_2425PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: cps:CPS_4865 xanthine dehydrogenase, molybdopterin binding subunit. (784 aa)    
Predicted Functional Partners:
Patl_2424
PFAM: ferredoxin molybdopterin dehydrogenase, FAD-binding [2Fe-2S]-binding CO dehydrogenase flavoprotein-like; KEGG: ppr:PBPRA2243 putative xanthine dehydrogenase, XdhA subunit.
 0.999
Patl_2426
Molybdenum cofactor sulfurylase; PFAM: protein of unknown function DUF182; KEGG: cps:CPS_4866 putative xanthine dehydrogenase accessory protein XdhC.
 
 
 0.990
Patl_2429
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
 
 0.972
Patl_2511
(2Fe-2S)-binding protein; PFAM: ferredoxin [2Fe-2S]-binding; KEGG: ccr:CC0022 isoquinoline 1-oxidoreductase, alpha subunit.
 
  
  0.961
Patl_2601
(2Fe-2S)-binding protein; PFAM: ferredoxin [2Fe-2S]-binding; KEGG: mlo:mll3837 isoquinoline 1-oxidoreductase, alpha subunit.
 
  
  0.960
Patl_3679
(2Fe-2S)-binding protein; PFAM: ferredoxin [2Fe-2S]-binding; KEGG: bja:blr0840 putative aldehyde dehydrogenase subunit III.
 
  
  0.935
Patl_2428
PFAM: Transthyretin; KEGG: sme:SMb21285 conserved hypothetical protein, transthyretin-like protein; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
  
 0.901
ppnP
Protein of unknown function DUF1255; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
     
  0.884
Patl_2430
PFAM: protein of unknown function DUF989; KEGG: hch:HCH_01090 predicted membrane protein.
 
     0.876
Patl_2427
KEGG: hch:HCH_01094 hypothetical protein.
 
     0.823
Your Current Organism:
Pseudoalteromonas atlantica
NCBI taxonomy Id: 342610
Other names: P. atlantica T6c, Pseudoalteromonas atlantica T6c, Pseudoalteromonas atlantica str. T6c, Pseudoalteromonas atlantica strain T6c
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