STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thrBHomoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. (331 aa)    
Predicted Functional Partners:
Patl_3578
KEGG: vvy:VV0652 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit.
 
 0.999
Patl_3580
KEGG: cps:CPS_4291 aspartokinase/homoserine dehydrogenase, threonine-sensitive; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase homoserine dehydrogenase amino acid-binding ACT homoserine dehydrogenase, NAD-binding; In the C-terminal section; belongs to the homoserine dehydrogenase family.
 
 0.999
Patl_0616
PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; KEGG: ssp:SSP0251 O-acetylhomoserine sulfhydrylase.
  
 
 0.880
Patl_3425
KEGG: son:SO3986 aspartokinase III, lysine-sensitive; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; Belongs to the aspartokinase family.
 
 
 0.857
Patl_1625
KEGG: pha:PSHAa1163 L-serine deaminase I; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain serine dehydratase beta chain; Belongs to the iron-sulfur dependent L-serine dehydratase family.
  
 
 0.844
Patl_0921
PFAM: Methionine synthase, vitamin-B12 independent Cobalamin-independent synthase MetE-like; KEGG: pha:PSHAa1470 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase.
   
 
 0.842
Patl_2886
TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase, class IV; KEGG: pha:PSHAa1270 branched-chain amino acid aminotransferase.
  
 
 0.839
Patl_1236
TIGRFAM: serine O-acetyltransferase; KEGG: cps:CPS_1130 serine O-acetyltransferase.
     
 0.825
Patl_4078
KEGG: pha:PSHAa0645 serine acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat serine acetyltransferase-like.
     
 0.825
Patl_3406
O-acetylhomoserine sulfhydrolase; KEGG: ppr:PBPRB1415 putative homocysteine synthase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes DegT/DnrJ/EryC1/StrS aminotransferase aromatic amino acid beta-eliminating lyase/threonine aldolase.
    
  0.810
Your Current Organism:
Pseudoalteromonas atlantica
NCBI taxonomy Id: 342610
Other names: P. atlantica T6c, Pseudoalteromonas atlantica T6c, Pseudoalteromonas atlantica str. T6c, Pseudoalteromonas atlantica strain T6c
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