STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE01_09358Uncharacterized protein. (299 aa)    
Predicted Functional Partners:
TSC10
3-dehydrosphinganine reductase.
     
 0.818
GPI11
Glycosylphosphatidylinositol (GPI) anchor assembly protein.
     
 0.818
VE01_07832
acidPPc domain-containing protein.
    
 0.632
VE01_09509
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
    
 0.611
VE01_01073
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.598
VE01_06666
Uncharacterized protein.
    
 0.577
VE01_04736
Uncharacterized protein.
    
 0.577
ISC1
Phospholipase C type enzyme.
     
 0.574
LCB4
Sphinganine kinase lcb4.
     
 0.573
VE01_05271
Uncharacterized protein.
     
 0.569
Your Current Organism:
Pseudogymnoascus verrucosus
NCBI taxonomy Id: 342668
Other names: P. verrucosus, UAMH 10579
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.