STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VE01_09924Uncharacterized protein. (363 aa)    
Predicted Functional Partners:
VE01_09060
CBF domain-containing protein.
   
  0.998
VE01_06447
WD_REPEATS_REGION domain-containing protein.
   
 
 0.998
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.998
UTP7
Small subunit (SSU) processome component.
   
 0.997
VE01_08266
Uncharacterized protein.
   
 0.997
UTP6
U3 snoRNP protein.
   
 
 0.997
UTP5
Small subunit (SSU) processome component.
   
 0.997
VE01_05695
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.997
ENP2
Small ribosomal subunit bioproteinsis.
   
 
 0.997
BFR2
rRNA-processing protein bfr2.
   
 
 0.996
Your Current Organism:
Pseudogymnoascus verrucosus
NCBI taxonomy Id: 342668
Other names: P. verrucosus, UAMH 10579
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.